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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891410.1_cds_XP_016446198.1_41081
CDS Infomation

[gene=LOC107771362] [db_xref=GeneID:107771362] [protein=villin-4-like] [protein_id=XP_016446198.1] [location=join(102710..102765,102910..103009,104066..104134,104211..104447,104542..104719,104802..104934,108779..108941,109032..109179,109306..109406,109587..109742,111083..111151,111244..111312,111415..111552,113726..113854,114666..114813,114978..114988,115294..115434,135493..135618,135688..135753,136237..136564,136640..136881,136972..137085)] [gbkey=CDS]
Sequence

ATGGCTGTTTCAATGAGAGATTTGGATCCAGCTTTTCAAGGAGCAGGCCAAAAGGCCGGA
ATAGAGATCTGGCGTATTGAAAAGCTAAGTCCAGTCCCTATTCCAAAGTCATCACACGGT
AAATTTTACACAGGAGACTCGTATATTGTTTTGAAGACCAGCACATCAAAAGCTGGTGCC
TTACGACATGATATTCATTATTGGCTTGGTAAAGATACTAGTCAGGATGAAGCTGGTGCT
GCTGCCATAAAAACTGTTGAATTAGATGCAGCACTTGGTGGGCGTGCGGTTCAATATCGT
GAAGTGCAGGGCCATGAAACTGAGAAGTTCCTTTCCTATTTCAAACCATGTATAATCCCT
CTAAAAGGTGGAATTGCATCTGGATTTAAGCATGTCGAGGAAGAAGAGTATAAGACCTGT
TTGTACGTATGCCAAGGGAAGCATGTTGTCCATGTGAAGGAGGTTCCTTTCGCTCGATCC
TCACTTAATCATGATGACATCTTCATTCTTGATACCAAGTCAAAAATCTTCCAATTTAAT
GGTTCCAATTCCTCTATTCAAGAAAGGGCGAAAGCACTTGAAGTTGTTCAGTACATTAAA
GATACGTACCACGACGGCAAATGTGAGGTCGCTGCAATTGAGGATGGTAAATTGATGGCT
GACGCTGAGACCGGAGAATTCTGGGGCTTTTTTGGTGGCTTTGCTCCTCTTCCAAGGAAG
ACTACAAGGGATGGGGCTAAAAGCATTGATACTGTTCCTACTAGATTGTATAGAGTTCAG
AAAGGGCAAGCAGAACCTCTTGAGATTGAGTCTTTGACAAGGGAGTTGCTAGATACAAAT
GGTTGCTATATAGTTGATTGTGGGATAGAAGTTTTTGTGTGGATGGGAAGAAACACTTCT
CTTGATGATAGGAAAACTGCAAGTGGGGCTGCAGATGAATTACTCTGTGGCCTTGATAGA
CCAAAGTGCCATGTAATTCGTGTAATTGAAGGGTTCGAGACTGTCATGTTCCGCTCAAAG
TTCGACTCTTGGCCTCAATCAACTAATGTGGCAGTGACGGAGGATGGTAGAGGCAAAGTT
GCTGCGCTTCTAAAGCGTCAAGGGCTTAATGTGAGGGGCCTAATGAAAGCAGCTCCTCCA
AAGGAAGAACCTCAACCATATATTGACTGCACAGGCAATTTACAGGTGTGGCGTGTGAAT
GGCCAGCAGAAGACTCTTCTTCAAGCATCAGATCAATCAAAATTTTATAGTGGAGACTGC
TATATATTCCAATATTCTTACCCTGGAGAAGATAAGGAGGAACATCTCATTGGCACCTGG
TTTGGGAAGCAAAGTGTTGAGGGAGATAGAGTTTCAGCAATTTCTCAAGCAGGCAAGATA
AGTGAGTCACTGAAGTTCTCAGCTACTCAGGCTCGCATTTATGAAGGATATGAACCAGTC
CAGTTCTTTGTCATCTTTCAGAGCTTTATTGTATTTAAGGGTGGTCTTAGTGAAGGATAC
AAAAAACACCTAGTAGAGAAGGAGCTTGCTGATGATACATATAAAGAGGATGGAATTGCA
TTATTCCGAATTCAGGGTACTGGACCTGATAATATGCAATCAATTCAAGTAGAACCTGTG
GCTTCATCTTTGAACTCCTCATATTGCTACATATTACACAGTGGCTCTTCTGTCTTCACA
TGGACCGGAAATCTTACCACCTCTGAGGACCAGGAACTTGTTGAGAGGCAGCTGGATCTT
ATCAAGCCTGATATGCAGTCGAAATTGCAAAAAGAAGGGGCAGAATCTGAGCAATTTTGG
GAGATATTGAGTGGAAAATCTGAATATCCTAGTGAGAAGATTGGACGGGATGCTGAAAGC
GATCCTCATTTGTTCTCGTGCACCTTCTCAAAAGGGGATCTAAAGGTGACAGAGATCTAC
AATTTCAACCAAGATGATTTGATGACAGAAGATATTTTTATCCTTGATTGTCATTCGGAT
ATTTATGTTTGGGTTGGCCAGCTGGTAGAGTACAAGAATAAAATGCAGGCTTTATCCATT
GGTGAGAAATTCCTGGAATATGATTTTCTTATGGAGAAACTATCTCACCAAGCTCCAATA
TATATTGTTATGGAAGGGAGTGAACCGTCTTTCTTCACTCGTCATTTCAGTTGGGACTCC
ATTAAATCTGCTATGCATGGGAACTCATTCCAAAGAAAGCTCACACTAGTGAAGAATGGG
GGCCCTCCACCAATGGATAAACCTAAAAGGAGAACACCTGTGTCATATGGTGGAAGGTCT
GCTGCCCCTGAGAAGTCACAGCGATCGAGGAGCGTATCTTTCAGCCCTGACCGAGTTCGT
GTTAGGGGCAGGTCTCCTGCTTTTAACGCACTGGCAGCTACTTTTGAGAACCCAAATGCT
AGAAATCTATCTACGCCTCCACCAATGGTGAGAAAGCTTTATCCAAAATCTGTGACTCCA
GATTCAGCAAAATTGGCACCCAGATCAGCAGCTATTGCAGCATTAACAGCAAGTTTTGAT
AAACCTTTACCCGCCAAGGACGTCATAATACCTCGCTCCATCAAAGGGATCCCTGAGGCA
CCAAAATTGAACACTGAAACCCTCAAATCAAGTCCTCAGGCCAACTCAAAGGAGAACTCA
GTTAATAGTACAATAGAGGAGGCTCCTAAACCTAAACCAGAAACAATTCAGGAAGATGTG
AAAGAGGGTGAAACTGAAGATGAGGAAGGACTTCCGATCTATCCTTATGACCGGCTTAAA
ACAACAGCAGCAGATCCTGTTACTGAAATTGATGTAACTAAGCGAGAGACTTACTTGTCT
TCAGAAGAGTTCAGAGAGAAATTTGGGATGGCTAAGGATGCTTTCTACAAGTTACCCAAG
TGGAAACAGAATAAGCTAAAAATGGCACTCCAGTTGTTCTGA

Peptide Sequence

PEP ID

XP_016446198.1
PEP Infomation

PREDICTED: villin-4-like [Nicotiana tabacum]
Sequence

MAVSMRDLDPAFQGAGQKAGIEIWRIEKLSPVPIPKSSHGKFYTGDSYIVLKTSTSKAGA
LRHDIHYWLGKDTSQDEAGAAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIP
LKGGIASGFKHVEEEEYKTCLYVCQGKHVVHVKEVPFARSSLNHDDIFILDTKSKIFQFN
GSNSSIQERAKALEVVQYIKDTYHDGKCEVAAIEDGKLMADAETGEFWGFFGGFAPLPRK
TTRDGAKSIDTVPTRLYRVQKGQAEPLEIESLTRELLDTNGCYIVDCGIEVFVWMGRNTS
LDDRKTASGAADELLCGLDRPKCHVIRVIEGFETVMFRSKFDSWPQSTNVAVTEDGRGKV
AALLKRQGLNVRGLMKAAPPKEEPQPYIDCTGNLQVWRVNGQQKTLLQASDQSKFYSGDC
YIFQYSYPGEDKEEHLIGTWFGKQSVEGDRVSAISQAGKISESLKFSATQARIYEGYEPV
QFFVIFQSFIVFKGGLSEGYKKHLVEKELADDTYKEDGIALFRIQGTGPDNMQSIQVEPV
ASSLNSSYCYILHSGSSVFTWTGNLTTSEDQELVERQLDLIKPDMQSKLQKEGAESEQFW
EILSGKSEYPSEKIGRDAESDPHLFSCTFSKGDLKVTEIYNFNQDDLMTEDIFILDCHSD
IYVWVGQLVEYKNKMQALSIGEKFLEYDFLMEKLSHQAPIYIVMEGSEPSFFTRHFSWDS
IKSAMHGNSFQRKLTLVKNGGPPPMDKPKRRTPVSYGGRSAAPEKSQRSRSVSFSPDRVR
VRGRSPAFNALAATFENPNARNLSTPPPMVRKLYPKSVTPDSAKLAPRSAAIAALTASFD
KPLPAKDVIIPRSIKGIPEAPKLNTETLKSSPQANSKENSVNSTIEEAPKPKPETIQEDV
KEGETEDEEGLPIYPYDRLKTTAADPVTEIDVTKRETYLSSEEFREKFGMAKDAFYKLPK
WKQNKLKMALQLF

Transcript Sequence

Gene sequence data has not been registered.